Yield Potential of Physic Nut (Jatropha curcas L.) at the First Years Cultivation on Dry Land of West Lombok, West Nusa Tenggara

Productivity of Physic Nut (Jatropha curcas L.) depends on environment and culture intensity. We evaluated yield potential of Jatropha curcas L. at dry land (sandy entisol soil type) of West Lombok, West Nusa Tenggara using three types of propagules, i.e., stem cutting, seed, and seed after pruning and were designed with Randomized Block Design in three replications during November 2006 until November 2007.

Result showed that productivity of nut is 880.78 kg/ha (352.31 g/plant) from stem cutting, 749.81 kg/ha (299.92 g/plant) from seed, and 484.11 kg/ha (193.64 g/plant) from seed followed by pruning after 2 weeks planting.

Team Researcher: Bambang B. Santoso, Hasnam, Hariyadi, Slamet Susanto, and Bambang S. Purwoko

Key words: Productivity, pruning, seed, stem cutting, type of propagule

Agronomi
Vol. 36 - No. 2 - Agustus 2008
http://www.ipb.ac.id/gallery/journal/agrohort/aboutagr.html



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The Effect of KCL and SP-36 Pesticide on Available Kalium, Absorption Kalium, and Result of Ground Nut (Arachis hypogaea L.) on Brunizem Soil

Molucca, in general and especially Ambon has ground nut fields with low productivity compared to national yield of ground nut. Brunizem has low levels of K and P nutrients. These conditions were interesting to be investigated.

The research took place in a plastic house for two months in Halong village, sub district Baguala. The research was done in a Completely Randomized Design with 2 Factors. The first factor was three levels of K fertilizer, ie K0 (no K fertilizer application), K1 ( 0.5 g KCl/pot) and K2 ( 1.0 g KCl/pot). The second factor was three levels of P fertilizers, ie P0 (no P fertilizer application), P1 (0.6 g SP-36/pot), and P2 (1.2 g SP-36/pot).


The aim of the research was to investigate the availability and sorption of potassium, growth and dryweight-of ground nut (Arachis hypogaea L.) seed due to the application of KCl and SP-36 fertilizers on Brunizem. The results of this research showed a high significant effect of potassium fertilizer treatment on soil-pH, availibility and sorption of K, plant height, stem diameter, and dry-seed weight of ground nut. Treatment g P fertilizer has a significant effect on soil pH, available K, plant height, and dry weight of seed.

The interaction of K and P fertilizers had no significant effect on K availability and sorption of K. K availability of 0.26 me/100 g and 4.95% of plant-K was attained at the treatment of 1.0 g KCl/pot. The high dry yield of ground nut (17.35 g/pot) was achieved at dose of 1.0 g KCl/pot, meanwhile dose of 1.2 g SP-36/pot gave the highest seed-dry yield of ground nut.

Team Reseaercher: Ch. Silahooy

Key words: K availability, K sorption, phosphate, ground nut

Agronomi
Vol. 36 - No. 2 - Agustus 2008
http://www.ipb.ac.id/gallery/journal/agrohort/aboutagr.html



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Callus Induction and Shoot Regeneration of In Vitro Rice Var. Fatmawati

Efficiency of shoot regeneration from rice callus explant is an important factor, particularly for the purpose of plant genetic improvement such as somaclonal variation, transformation and in vitro selection.

In the attempt of gaining shoot regeneration, callus induction and shoot regeneration experiments were conducted in the Biological Cell and Tissue Culture Laboratory, Indonesian Center for Agricultural Biotechnology and Genetic Resources Research and Development. Mature seed was used as an explant.


The media formulation for calli induction was MS + 2.4-D (1, 3, 5 and 7 mg/l ) + prolin (0 and 100 mg/l ) and hydrolyzed casein 3000 mg/l. The media for shoot regeneration was (1) MS + BA (1.2 and 3 mg/l ) + IAA 0.8 mg/l + prolin 100 mg/l, and (2) MS + BA 2 mg/l + IAA 0.8 mg/l + zeatin (0.1; 0.2 and 0.3 mg/l).

The result showed that the embryogenic calli could be produced from MS + 2.4-D 3 mg/l + hydrolyzed casein 3000 mg/l treatment and the best media for shoot induction was MS + BA 2 mg/l + IAA 0.8 mg/l + zeatin 0.2 mg/l. The obtained plantlets were successfully acclimatized in the greenhouse.

Team Researcher: Endang G Lestari and Rosa Yunita

Key words: Embryogenic calli, rice, shoot regeneration

Agronomi
Vol. 36 - No. 2 - Agustus 2008
http://www.ipb.ac.id/gallery/journal/agrohort/aboutagr.html




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Indonesian Universities

Indonesian Universities

UGM Universitas Gadjah Mada

ITB Institut Teknologi Bandung

UNPAD Universitas Padjadjaran

Unibraw Universitas Brawijaya

ITS Institut Teknologi Sepuluh Nopember

UNDIP Universitas Diponegoro

UNY Universitas Negeri Yogyakarta

Unila Universitas Lampung

Unmul Universitas Mulawarman

IPB Institut Pertanian Bogor

Gunadarma Universitas Gunadarma

UNS Universitas Negeri Solo

UKI Universitas Kristen Indonesia

Unud Universitas Udayana

Unsyiah Universitas Syiah Kuala

UAD Universitas Ahmad Dahlan

Unej Universitas Negeri Jember

USU Universitas Sumatera Utara

Unsoed Universitas Jenderal Soedirman

Unair Universitas Airlangga

Petra Universitas Kristen Petra

AKA Bogor Akademi Kimia Analisis Bogor

UII Universitas Islam Indonesia

Atmajaya Universitas Katolik Indonesia Atma Jaya

Unhas Universitas Hasanudin

Unja Universitas Jambi

Unesa Universitas Negeri Surabaya

Unnes Universitas Negeri Semarang

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The Effect of Post-harvest Maturation Storage and Storage Period to Seed Viability of Papaya (Carica papaya L.)

The objective of this experiment was to study the influence of post-harvest storage and storage period to seed viability. The research was conducted in the Laboratory of Seed Science and Technology and the green house at Leuwikopo IPB Darmaga, from February until August 2007.

The experiment used split-plot design with three replications. The main plot was seven periods of storage: 0, 3, 6, 9, 12, 15, and 18 weeks. The sub plot was the period of post-harvest maturation storage (use the fruits with 30-40% yellow coloured): 0, 2, 4, 6 days post-harvest storage, and control fruits that ripe on the tree (with 80-90% yellow coloured).


The control fruits have the best seed viability and vigor. Viability of seed from fruits with 0, 2 and 6 days post-harvest storage was significantly less than that of control. Seed from four days post-harvest storage have same viability as control.

Post-harvest storage can improve physiological seed quality on the seed that must be harvested before the time of physiological maturity, especially four days post-harvest storage.

Team Researcher: Endang Murniati, Maryati Sari, and Ema Fatimah

Key words: Papaya, seed, viability, post-harvest maturation storage, storage period

Agronomi
Vol. 36 - No. 2 - Agustus 2008
http://www.ipb.ac.id/gallery/journal/agrohort/aboutagr.html
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Morpho-Ecotype and Proximates Characterization of Banda Nutmeg, (Myristica fragrans Houtt)

A field research was conducted to study morpho-ecotype and proximate aspects of Banda nutmeg (Myristica fragrans Houtt.) in three ecotypes: Banda Islands, Ambon Island, and Ceram Island in Maluku.

The objectives of the study were to characterize morpho-ecotype of the Banda nutmeg, to investigate the trees productivity across three ecotypes, and to identify the proximate characteristics of the fruit. Ten productive nutmeg sample trees aged ranging 25 to 50 years were chosen for observations.


In morphological observation, 21 items were described based on IBPGR procedure, and then subjected to UPGMA cluster analysis. The proximates of nutmeg flesh including edible portion (EP), water content, protein content, fat content, and pectin content were analyzed by AOAC procedure. Morphological and proximate data were analyzed using SAS. Results show that Moluccas ecotypes characterized by hill and mountain has tectonic mountain physiography and karst soils with a slope of 16 to 40%. Ambon and Banda ecotypes are mainly composed of volcanic soils, whilst Luhu has sediment.

The climate of Moluccas ecotype is dominated by IIIC type, except Banda Island which has IIB. The morphological traits of the nutmeg are stabile across three ecotypes (similarity index, SI 90%). Productions of fruit, nutmeg, and mace show no difference between the three sites. They are 137.73, 19.27, and 3.07 kg per tree, respectively. All proximate parameters analyzed are not statistically different, except EP. EP of Ambon ecotype is statistically different from that of Ceram but it is similar to Banda ecotype.

Team Researcher: Ilyas Marzuki, M. R. Uluputty, Sandra A. Aziz, and Memen Surahman

Key words: Nutmeg, morpho-ecotype, proximate, ecotype.

Agronomi
Vol. 36 - No. 2 - Agustus 2008
http://www.ipb.ac.id/gallery/journal/agrohort/aboutagr.html


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In Vitro Test of Potato Clones Derived from Crossing between cv. Atlantic and Granola for Their Tolerance to Bacterial Wilt (Ralstonia solanacearum) a

Several bacterial pathogens can cause diseases of potato. Ralstonia solanacearum and Erwinia carotovora are those of the world’s most important diseases of potato, especially in tropical climates.


This experiment was aimed to obtain putative potato cultivars having good tolerance to bacterial wilt caused by R. solanacearum and soft rot caused by E. carotovora. Two adopted potato cultivars in Indonesia, cv. Atlantic (2n=4X=48) and cv. Granola (2n=4X=48), were used as parents. The experiment was arranged in a Randomized Complete Design.
Test for tolerance was perfomed in vitro using BF15 as susceptible control and Solanum stenotonum as tolerance control. The result showed that there was high diversity of tolerance level to both R. solanacearum and E. carotovora. Some clones showed good tolerance level as compared to cv. Atlantic and cv. Granola, but none showed that as compared to S. stenotonum.

Team Researcher: Awang Maharijaya, Muhammad Mahmud, and Agus Purwito
Key words: in vitro testing, potato, R. solanacearum, E. carotovora

Agronomi
Vol. 36 - No. 2 - Agustus 2008
http://www.ipb.ac.id/gallery/journal/agrohort/aboutagr.html


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Leaf Characteristic of Jatropha curcas L. and Its Relation to Photosynthesis

The objective of this research was to study the morphology and physiology of jatropha leaves and its relation to photosynthesis. Research was conducted using Randomized Complete Block Design with single factor, i.e., leaf ages at the canopy with ten replications.


The results showed that jatropha had phyllotaxy 5/13 with angular divergence 1380. In early growing leaf enlarged sharply and then constant after 9 week, remaining green for 14 weeks. Chlorophyll a, b, and total achieved maximum at 9 week, i.e., 0.45 g/cm2, 0.19 g/cm2, and 0.62 g/cm2, respectively. Photosynthesic rate was maximum at 6 week, i.e., 8.99 µmol/m2/s, while number of stomata was maximum at 9 week (289.47 mm2).

This finding implies that leaf number 11 to 13 or age 6 week after emergence could be used as reference for photosynthetic evaluation.


Team Researcher: Ince Raden, Bambang S. Purwoko, Hariyadi, Munif Ghulamahdi, and Edi Santosa

Key words: Jatropha curcas L., leaf arrangement, photosynthetic, reference leaf

Agronomi
Vol. 36 - No. 2 - Agustus 2008
http://www.ipb.ac.id/gallery/journal/agrohort/aboutagr.html

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Characterization of Full Length Sequence of JJ3 Isolated from Shade Tolerant Soybean

The aim of this study was to characterize full length sequence of JJ3 isolated from shade tolerant soybean. The characterization of full length sequence involved analyses of structure of full length sequence, open reading frame (ORF) or coding sequence (CDS), and homology.

The analyses of JJ3 full length sequence structure were done using GeneScanW program, coding sequence (CDS) or open reading frame (ORF) using ORF Finder program, and the homology of JJ3 full length sequence were done using BLAST and clustalW programs.


Results showed that the full length sequence of JJ3 consisted of single exon and polyA. Single exon was a coding sequence (CDS) 633 bp produced open reading frame (ORF) with 210 amino acid deduction comprised of 136 conserved amino acids and 77 varied amino acids. The conserved domain of JJ3 produced functional protein, PsaD photosystem I (PSI) subunit, related to photosynthetic transport electron in PSI reaction center.

The full length of JJ3 homolog to psaD, a gene encoding protein subunit photosystem I (PSI) related to mechanism of plant adaptation to shade stress, in wood tobacco (Nicotiana sylvestris), rice (Oryza sativa), tomato (Lycopersicon esculentum), barley (Hordeum vulgare), spinach (Spinacia oleracea), Arabidopsis (Arabidopsis thaliana), and potato (Solanum tuberosum).

Team Researcher: Nurul Khumaida, Kisman, and Didy Sopandie
Key words: full length sequence, gene, homology, shade tolerant, soybean

Agronomi
Vol. 36 - No. 2 - Agustus 2008
http://www.ipb.ac.id/gallery/journal/agrohort/aboutagr.html
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Selection of Isolates of Entomopathogenic Fungi and the Bioefficacy of Their Liquid Production against Leptocorisa oratorius Nymphs

Entomopathogenic fungi are fungi pathogenic to insects and are widely used as biocontrol agents for insect pests. The aim of the research was to study the virulence of Beauveria bassiana and Metarhizium sp. isolates and to evaluate the efficacy of liquid production of those fungi against Leptocorisa oratorius (rice bug).

Twelve isolates of B. bassiana and five isolates of Metarhizium sp. were used in this research. Selection result of B. bassiana isolates on third-instar rice bug nymphs showed that the isolate KBC caused the highest mortality rate (93%), while the lowest (46%) was caused by the isolate BBY 725.


The shortest time needed to produce 50% mortality (Lethal time, LT50) was 3.52 days (isolate KBC). The longest time (10.36 days) was produced by isolate SLSS. The mortality of rice bug nymphs caused by Metarhizium isolates was only 50-62%. The shortest LT50 of Metarhizium (5.75 days) was produced by isolate Mtm, while the longest (7.46 days) was produced by isolate Mpx.

Bioefficacy tests on six kinds of liquid formations of entomopathogenic fungi indicated that all were effective, mostly with LT50 d” two days. The mortality rates of rice bug nymphs caused by bioefficacy of fungus liquid production was generally above 85% up to 100%. The liquid media for entomopathogenic fungi performed better compared with solid media (SDA), as indicated by the greater mortality rate and shorter LT50.

research team: Siti Herlinda, Sri Indah M, and Suwandi (Universitas Sriwijaya, Dinas Tanaman Pangan dan Hortikultura, Provinsi Sumatera Selatan)
Key words: Entomopathogenic fungi, isolate, liquid production, Leptocorisa oratorius

INDONESIAN JOURNAL FOR MICROBIOLOGY
Volume 2, Nomor 3, Desember 2008
url:http://www.ipb.ac.id/gallery/journal/mbi

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Phylogenetic Evidence that Two Submerged-Habitat Fungal Species, Speiropsis pedatospora and Xylomyces chlamydosporus, Belong to the Order Jahnulales I

The genera Speiropsis and Xylomyces are anomorph fungi. The taxonomic address for the fungi has been unclear. In the study, observation of morphological traits indicates that they have a unique pattern of mycelia with dark-brown to black colour and thick-walled hyphae.

The same culture patterns of certain fungi isolated from freshwater habitats in Thailand were selected from BIOTEC Culture Collection (BCC, Thailand), while more species were added from Centraalbureau voor Schimmelcultures (CBS, Netherlands). These fungi were composed of Jahnula spp. (2-celled ascospores), Brachiosphaera tropicalis (hyaline and 4-5 armed conidia), S. pedatospora (hyaline and branches conidia) and Xylomyces sp. (dematiaceous and fusiform chlamydospores).


This study was undertaken to confirm the taxonomic address for S. pedatospora and Xylomyces based on phylogenetics relationships as inferred from their ITS rDNA sequence data by using MP (unweighted and successive weighted MP), NJ, ML and Bayesian analysis. Phylogenic analysis revealed that isolates of S. pedatospora (2 strains) was a member of the Order Jahnulales and clustered with Jahnula spp. (5 strains) and B. tropicalis (4 strains) with >82% bootstrap support and 100% posterior probabilities.

Four isolates of X. chlamydosporus, X. elegans and X. aquaticus were shown to be polyphyletic within the Jahnulales and Pleoporales. The MP and NJ showed the same topology as in the Jahnulales clade obtained by ML analysis.

research team: Riry P, Nattawut Boonyuen, and Somsak S (BIOTEC National Center for Genetic Engineering and Biotechnology, Thailand Science Park, Balai Penelitian Tanaman Buah Tropika, Sumatera Barat)
Key words: ITS rDNA, Speiropsis pedatospora, Xylomyces

INDONESIAN JOURNAL FOR MICROBIOLOGY
Volume 2, Nomor 3, Desember 2008
url:http://www.ipb.ac.id/gallery/journal/mbi
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Free-Living Ice-Nucleating Active Bacteria from High Mountain Lake Habitats

The team collected the culturable heterotrophic bacteria from oligotrophic high mountain lake habitats and tested their capability to induce ice formation. Direct plating was carried out using low-nutrient medium at a temperature of between 3 and 4?C. As many as 84 isolates were recovered from glacial ice and natural biofilm growing on granite rocks surface.

Six out of 84 isolates were capable of expressing the ice-nucleation phenotype. After autoclaving the cell suspension at 121?C for 15 min, isolate J78 was still able to retain the ability for ice formation. Heat-stable ice nuclei produced by ice-nucleating active bacteria have potential applications in biotechnology.


Characterization of INA bacteria was performed employing live-dead Gram staining and molecular methods. Universal primers for Bacteria (S-D-Bact-0008-b-S-20 and S-D-Bact-1524-a-A-18) were used for PCR to amplify almost the full length of the 16S rRNA genes of selected INA isolates. Restriction fragment length polymorphism analysis resulted in 2 unique patterns, as represented by J43 and J83, respectively.

Based on DNA sequencing of 16S rRNA gene, isolate J43 (GeneBank accession no. AJ864852) was closely related to Pseudomonas mephitica (99.2% sequence similarity) and Janthinobacterium lividum (99% similarity), whereas isolate J83 (GeneBank accession no. AJ864859) showed 100% sequence identity to Pseudomonas fluorescens.

research team: Munti Yuhana and Kurt Hanselmann (IPB, University of Zurich)
Key words: high mountain lake habitats, ice nucleation, 16S rRNA gene, free-living bacteria

INDONESIAN JOURNAL FOR MICROBIOLOGY
Volume 2, Nomor 3, Desember 2008
url:http://www.ipb.ac.id/gallery/journal/mbi
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Stability of Two Probiotics Bacteria of Goat Milk Yoghurt in Rat Digestive Tract

Increased age will affect the bacterial population of the human digestive tract, in which many bacteria will adapt and colonize different sites. Combining probiotics and prebiotics in what has been called a synbiotic could beneficially affect the host by improving survival and implantation/adhesion of live microbial dietary supplements in the gastrointestinal flora.

Probiotic bacteria are expected to survive in the digestive tract to give health effects to the host by balancing the intestinal microflora. The addition of fructo-oligosaccharides is expected to increase viability and growth of probiotics in the digestive tract.


The objective of the current research is to investigate the effect of probiotic yoghurt and synbiotic yoghurt of Etawa Breed Cross Saanen (PESA) goats together with fructo-oligosaccharides, on female rats and to study the stability of probiotic bacteria in the digestive tracts.

The results showed that synbiotic yoghurt intake had no significant influence (p>0.05) on ration consumption, body weight gain, feed conversion, final body weight and mortality. The synbiotic intake significantly increased the population of Bifidobacterium longum (p<0.01) and Lactobacillus acidophilus (p<0.05), but in contrast decreased (p<0.05) the population of Escherichia coli. The yoghurt synbiotic treatment over 14 days influenced probiotic bacteria’s stability as shown by the reduced population of B. longum and L. acidophilus.

research team:Rarah RAM, Komang G, and Gina LM
Key words: probiotic, prebiotic, yoghurt, digestive tract, synbiotic

INDONESIAN JOURNAL FOR MICROBIOLOGY
Volume 2, Nomor 3, Desember 2008
url:http://www.ipb.ac.id/gallery/journal/mbi

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Biosynthesis of Polyamide 4, a Biobased and Biodegradable Polymer

Polyamide 4, which is composed of repeating unit of ?-aminobutyric acid (GABA), is a biobased and biodegradable polymer since it can be synthesized from renewable material instead of fossil-based material.

GABA is produced by decarboxylation of glutamate (Glu) using glutamate decarboxylase (GAD: EC 4.1.1.15), which is produced by some microorganisms. In this study, enzymatic conversion of GABA from glutamate by Lactococcus lactis and Escherichia coli cell and chemical polymerization of GABA to polyamide 4 were revealed.


The results show that GAD activity of E. coli was higher than that of L. lactis. The treatment of E. coli cell by heating and sonication increased the GAD activity and conversion rate of glutamate to GABA was up to 70.5%. The optimum temperature for this conversion is 37ºC. On the other hand, chemical synthesis of polyamide 4 was catalyzed by heating GABA at 215ºC for 2 minutes.

reasearch team: Iwan Saskiawan
Key words: polyamide 4, biodegradable polymer, ?-aminobutyric acid, glutamate decarboxylase

INDONESIAN JOURNAL FOR MICROBIOLOGY
Volume 2, Nomor 3, Desember 2008
url:http://www.ipb.ac.id/gallery/journal/mbi

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Analysis of Pink Pigmented Facultative Methylotroph Bacteria from Human Environments

The formation of pink biofilm in wet places are usually correlated with chlorine-resistant pink pigmented facultative methylotrophs (PPFM).

Researchers investigated the presence of PPFM bacteria through bacterial isolation and detection of mxaF gene from wet places of human-made environments. A total of eighteen PPFM bacterial isolates were recovered from the formation of biofilm bacterial of four test places such as washstands, bathrooms, and potable water supplies. Confirmation of the isolates through biochemical analysis were done using catalase, oxidase and urease tests.

Chlorine-resistance-activity was assayed for all of the isolates. Antibiotic resistance were examined for ampicillin (25 µg), tetracycline (30 µg), kanamycin (30 µg), trimethoprim (1.25 µg), and streptomycin (10 µg) using the agar diffusion method. Genomic DNA was subjected to PCR analysis with primers corresponding to the 5’- and 3’- end conserved segments of the mxaF gene. PCR amplification followed by DNA sequencing of 16S rRNA gene were done for some isolates.


They recovered 18 isolates of PPFM bacteria. Biochemical analysis indicated that the isolates were positive for catalase, oxidase, and urease activities. Chlorine-resistance-analysis showed the majority of the isolates were resistant to chlorine. Antibiotic resistance assays showed all of the isolates exhibited resistance to trimethoprim but were sensitive to streptomycin, kanamycin, and tetracycline but were variably resistant to ampicilin.

PCR detection using specific primers for the mxaF gene gave a positive result for all of the isolates. DNA sequencing of the 16S rRNA gene of two isolates showed that isolate WD10 had a 98% similarity with the mxaF gene from Methylobacterium lusitanum strain MP2 and isolate WK2 had a 98% similarity to the mxaF gene from Afipia felis strain RD1.

The formation of pink biofilm of four wet areas in this study were correlated with the presence of chlorine-resistant PPFM bacteria and we confirmed with the presence of the mxaF gene in all of the isolates. This finding needs to be widely publicized since some PPFM bacteria were known as opportunistic pathogens.

reasearch team: Diana E, Andreas K (School of Biotechnology, Universitas Katolik Indonesia Atma Jaya)
Key words: pink pigmented facultative methylotroph, human environments, chlorine resistance

INDONESIAN JOURNAL FOR MICROBIOLOGY
Volume 2, Nomor 3, Desember 2008
url:http://www.ipb.ac.id/gallery/journal/mbi

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Prospective Use of 1-Aminocyclopropane-1-Carboxylate Deaminase-Producing Bacteria for Plant Growth Promotion and Defense against Biotic and Abiotic St

The 1-aminocyclopropane-1-carboxylate (ACC) deaminase (EC4.1.99.4) is an enzyme produced by some soil bacteria to degrade ACC (the immediate precursor of ethylene) to reduce ethylene biosynthesis in higher plants.

Increased concentrations of ethylene in plant tissues, which are triggered by various biotic and abiotic stresses, inhibits plant growth and weakens the plant defense against the stressors. Various findings on the successful use of ACC deaminase producing bacteria for plant growth under unfavorable soil conditions are inspiring their use in tropical peat-soil-agriculture, which possesses bio-physical constraints.



It has been proven that inoculation of plants with ACC deaminase producing bacteria decreased ethylene inhibition generated by unfavorable environmental conditions, such as nutrient shortage, flooding, drought, high salts, and the presence of heavy metals and organic pollutants.

Understanding the mechanisms by which ACC deaminase-producing bacteria act to reduce plant stress and the fitness of bacterial traits with the properties and constraints of peat-soils becomes a key to utilize these bacteria in improving crop productivity. The bacteria may ameliorate plant stress as well as promote plant growth under seasonal bio-physical changes of peat-soils that are usually encountered in the field.

reasearch team: Edi Husen, Aris T, Antonius S, and Rasti S (IPB, Indonesian Soil Research Institute)
Key words: ACC deaminase, bacteria, plant growth promotion, biotic and abiotic stresses, peat-soil

INDONESIAN JOURNAL FOR MICROBIOLOGY
Volume 2, Nomor 3, Desember 2008
url:http://www.ipb.ac.id/gallery/journal/mbi

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The Influence of Oil Concentration, Nitrogen and Phosphorus Composition on Crude Oil Biodegradation by Epyzim and Mixed Cultures of Pseudomonas aerugi

Biological methods have gained attention as an alternative treatment for oil degradation in pollution remediation. External and internal factors have a great influence on crude oil biodegradation.

The experiment studied the effect of oil concentrations and ratios of Ammonium and Phosphate on oil degradation in mixed cultures of local strains of Pseudomonas aeruginosa and Arthrobacter simplex.



The oil degradation ability of this mixed culture was compared to the dormant culture of Enzyim. The increase of oil concentration, from 1, 3, 5 and 10% (w/v), significantly lowered the ability of both cultures to degrade the oil i.e from 83 % for 1% oil concentration to 64% for 10% oil concentration using local strains.

The local strains showed better capability compare to the dormant culture. Medium composition was designed by three levels of ammonium concentration (7.6, 37.9 and 75.8 mg l-1) and two levels of phosphate concentration (2.0 and 9.9 mg l-1). The ratio of ammonium to phosphate of 3.8:1.0 in the growth media has resulted the maximum level of oil degradation, i.e 83% and 88%, for dormant and local cultures respectively.

The results suggest a potential usage of local microorganisms in degrading crude oil-polluted water.

reasearch team:Erliza Noor, Linawati Hardjito
Key words: oil pollution, oil biodegradation, Epyzim, Pseudomonas aeruginosa, Arthrobacter simplex

INDONESIAN JOURNAL FOR MICROBIOLOGY
Volume 2, Nomor 3, Desember 2008
url:http://www.ipb.ac.id/gallery/journal/mbi
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Recent Developments in the Bioconversion of Lignocelluloses into Ethanol

Ethanol has been commercially produced using sugars derived from sugarcane and corn. Recently, research has been focused on the development of thermotolerant and ethanol-tolerant yeast or bacteria that are able to produce ethanol efficiently, as well as the development of lignocellulosic materials as the carbon sources of fermentation.

Utilization of lignocellulosic materials as fermentation substrate is promising since they are available in large amounts, renewable and relatively cheap. A lignocellulose biomass is a complex mixture of carbohydrate polymers. In order to develop an efficient process, there have been many attempts to obtain more efficient ways in the conversion of lignocelluloses to ethanol, including pretreatment, enzymatic hydrolysis of lignocelluloses and direct co-culture fermentation.



This paper describes the production process of ethanol from starch-containing material, recent developments on the enzymatic bioconversion of lignocelluloses into sugars and their subsequent fermentation into ethanol and the possible recombination of microbes for the direct conversion of lignocelluloses into ethanol.

reasearch team: Koesnandar, Is Helianti, and Ninik N (BPPT)
Key words: lignocelluloses, ethanol, bioconversion

INDONESIAN JOURNAL FOR MICROBIOLOGY
Volume 2, Nomor 3, Desember 2008
url:http://www.ipb.ac.id/gallery/journal/mbi
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Characteristics of Phosphate-Solubilizing Bacteria Isolated from Acid Soil of Cikopomayak, West Java, Indonesia

Phosphate-solubilizing bacteria were isolated from acid soil from Cikopomayak. Microbiological assay showed that the bacteria were Gram negative, rod-shaped, and lacked red pigment on Pikovskaya medium.

Isolate A synthesized red pigment on nutrient agar medium, while isolate B formed slightly red pigment on nutrient agar medium as well as on Voges Proskauer medium. The ratio of clearing zone to colony for isolate A and B were approximately 2.1 and 1.9, respectively.



Biochemical assays showed that both isolates A and B utilized glucose, lactose, sucrose, mannitol, glycerol, mannose, urea, indole, and produced catalase, but neither produced amylase and oxidase. The bacteria are identified as Serratia marcescens. The ability to solubilize phosphate decreased or was even lost when subcultured on nutrient agar medium.

However, the ability to solubilize phosphate was recovered gradually with the addition of phosphate. The results presented here suggest that the ability to solubilize phosphate and to synthesize the red pigment may be inversely correlated.

reasearch team: Happy widiastuti (Indonesian Biotechnology Research Institute for Estate Crops)
Key words: acid soil, Serratia marcescens, phosphate-solubilizing bacteria, medium, pigment

INDONESIAN JOURNAL FOR MICROBIOLOGY
Volume 2, Nomor 3, Desember 2008
url:http://www.ipb.ac.id/gallery/journal/mbi
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Cuscus (Phalangeridae) Hunting by Biak Ethnic Group in Surrounding North Biak Strict Nature Reserve, Papua

Study on cuscus hunting as a form of wildlife utilization by Biak ethnic group surrounding the North Biak Strict Nature Reserce (CABU) was carried out through direct observation and interview with hunter respondents and other key respondents among four villages that purposively chosen i.e. Inswambesi, Kayomi, Wasani, dan Sansundi at the Warsa District of Biak Numfor, Papua.


Two species of cuscus occurs in the study site were common cuscus (Phalanger orientalis) and spotted cuscus (Spilocuscus maculatus) and they were observed as hunting target in CABU. Hunting was performed partly as routine activity used various traditional tools (slash blade, trap, spear, and calling cuscus) and modern weapon (firearm).

Cuscus hunting was done to supply animal protein for households, inspite some hunting results raised for consumption and market purposes. For one period of hunting 3-4 cuscus were caught and it was lower than five years ago. It was indicated that the population condition was vulnerable on overharvest and at the present time cuscus population tend to decreased.

Traditional wisdom of Biak ethnic group should be explored and practiced again as the form of local law in order to manage cuscus hunting for the future cuscus conservation program.

research team:Freddy P, Johan FK (Papua State University)
Key words: cuscus, hunting, biak ethnic group



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Tolerance Levels of Roadside Trees to Air Pollutants Based on Relative Growth Rate and Air Pollution Tolerance Index

Motor vehicles release carbon monoxide, nitrogen dioxide, sulphur dioxide, and particulate matters to the air as pollutants. Vegetation can absorb these pollutants through gas exchange processes.

The objective of the study was to examine the combination of the relative growth rate (RGR) and physiological responses in determining tolerance levels of plant species to air pollutants.


Physiological responses were calculated as air pollution tolerance index (APTI). Eight roadside tree species were placed at polluted (Jagorawi highway) and unpolluted (Sindangbarang field) area. Growth and physiological parameters of the trees were recorded, including plant height, leaf area, total ascorbate, total chlorophyll, leaf-extract pH, and relative water content.

Scoring criteria for the combination of RGR and APTI method was given based on means of the two areas based on two-sample t test. Based on the total score of RGR and APTI, Lagerstroemia speciosa was categorized as a tolerant species; and Pterocarpus indicus, Delonix regia, Swietenia macrophylla were categorized as moderately tolerant species. Gmelina arborea, Cinnamomum burmanii, and Mimusops elengi were categorized as intermediate tolerant species. Lagerstroemia speciosa could be potentially used as roadside tree. The combination of RGR and APTI value was better to determinate tolerance level of plant to air pollutant than merely APTI method.

reasearch team:Sulistijorini, Zainal AM, Nizar N, Ahmad Bey, Soekisman T
Key words: air pollutants, tolerance of roadside trees, relative growth rate, physiological responses, air pollution tolerance index

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The Presence of Tobacco Mosaic Virus in the Compost Extract of Cigar Tobacco Debris

Tobacco mosaic virus (TMV) is resistance to high temperature and able to survive over 10 years on dried leaves, and plant debris is considered as source of inoculums of TMV in the field.

In order to inactivate TMV, TMV-infected cigar tobacco debris was composted at starting temperature of 50 �C for two to three days; however, TMV was still infective in the extract compost. If a half leaf cigar tobacco 'H877' was inoculated with compost extract, the symptoms appeared as a necrotic local lesion (NLL) and did not develop systemic lesions. The dilution end point of TMV in extract compost was 10-3.


The number of lesion was higher in the glasshouse with average daylight temperature of 32 �C than in the field with average daylight temperature of 29-30 �C. The number NLL was lower and NLL size seemed to be smaller on the first and second inoculated leaves with extract than that of on the first and second inoculated leaves with TMV inoculums.

There was a delay of time about 58-106 hours after inoculation of NLL from extract compost inoculums to appear than those of from TMV inoculums. These could be happened because of mineral nutrients of compost and also the temperature of maintaining tobacco plant which inhibited the infections, and of a thermal composting process which destroyed some TMV particles, particularly degraded it�s coat protein.

reasearch team:Wiwiek SW, Muhammad Hanapi, Ignasius H (Jember University)
Key words: TMV, extract water compost, cigar tobacco debris


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Moth Diversity at Gunung Halimun-Salak National Park, West Java

A study on moth fauna with focus on macro-moths was conducted at Gunung Halimun-Salak National Park from January to December 2007. The aims of the study were to acquire information of macro-moth diversity and to access the composition of the species at this area. Another objective of the research was to explore undescribed species of moths that inhabit this park.


The result showed that a year collecting time with four sampling sites recorded only about 86% of estimated value in this park (846 of 983 species). Index diversity based on Fisher�s ? is high. In addition, the number of families recorded from this park is also high, 29 families, or about half of the moth families that occur in Indo-Malayan region.

Citiis site was the highest among other sites in term of the diversity index, while Gunung Botol is the lowest. These two sites have a few species in common. In general, Geometridae, Noctuidae, and Pyralidae dominate across all sites. The other significant finding of the research is that Dudgeonidae that has never been recorded from Indonesia was found at Citiis site.

reasearcher: Hari Sutrisno (LIPI Div. Zoology)
Key words: diversity, macro-moths, similarity



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The Effect of Seaweed Eucheuma cottonii on Superoxide Dismutase (SOD) Liver of Hypercholesterolemic Rats

Intracellular antioxidant superoxide dismutase (SOD) was reported decreased in the liver and kidney of hypercholesterolemic rats. The study was conducted to observe the effect of seaweed Eucheuma cottonii powder on the profile of blood cholesterol and the level of SOD in liver tissues of hypercholesterolemic rats by using immunohistochemical technique.


Twenty male Wistar rats were used for this study. Those rats were divided into four groups; (i) negative control group (A), (ii) hypercholesterolemia group treated by 5% seaweed powder (B), (iii) hypercholesterolemia group treated by 10% seaweed powder (C), and (iv) Positive control group or hypercholesterolemia group (D).

The experiment was carried out for 35 days. Hypercholesterolemia condition (> 130 mg/dl), except group A, was achieved by feeding the rats with commercial diet containing 1% cholesterol. Drinking water was given ad libitum for 40 days.

The results showed that seaweed powder decreased the total cholesterol, low density lipoprotein (LDL), triglyceride, and increased the level of high density lipoprotein (HDL) and SOD status in the liver tissues of hypercholesterolemic rats. The treatment of 10% seaweed powder gave better results than that of 5%. These results suggested that dietary fiber such in the seaweed powder has antioxidant activity.

reasearch team: Tutik W, Ans Budi H, Made A
Key words: superoxide dismutase (SOD), seaweed-Eucheuma cottonii, hypercholesterolemia, liver, immunohistochemistry


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Secretory Duct Structure and Phytochemistry Compounds of Yellow Latex in Mangosteen Fruit

Yellow latex is the main problem in mangosteen agribusiness, because it is one factor lowering the fruit quality. The structure of yellow latex secretory ducts in the flower and fruit as well as in the root, stem and leaf of mangosteen (Garcinia mangostana L.) seedling and the qualitative phytochemistry of yellow latex were studied.


The ducts were branched, canal-like type. They were found in the exocarp, mesocarp, endocarp, aril of the fruit, flower, stem, and leaf. In the fruit, the biggest diameter of the secretory ducts was found in the endocarp. There were continuous secretory ducts from fruit stalk to the fruit. Ultrastructural observation showed that the ducts surrounded by specific epithelial cells, which were living cells containing dense cytoplasm with plastid, mitochondria and golgi apparatus organelles.

The qualitative test indicated that the yellow latex collected from stem bark, outer part of fruit, young fruit pericarp, mature aril and young aril contained terpenoid, flavonoid and tannin, but not alkaloid, saponin and steroid, except in the young aril containing the steroid.

reasearch team: Dorly, Soeksiman T, Roedhy P, and Juliarni
Key words: secretory ducts, yellow latex, endocarp, aril, epithelial cells



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Effect of Leaf Litters and Soils on Viability of Entomopathogenic Fungi Beauveria bassiana (Bals.) Vuill

Viability of Beauveria bassiana is extremely low due to toxic compounds in soils. The research was aimed to study the effect of four groups of media on viability of B. bassiana Bb-Pb2.

The first group was leaf litters of onion, flowering white cabbage, cabbage, and chinese mustard, respectively; the second group was the soils containing decomposed residues of each plant of the first group; the third group was the mixtures of each media of both groups above (1:1), and the fourth group was natural top soil as a control. Each plastic bag filled with one kg of each medium was inoculated with ten ml of B. bassiana conidia (106/ml of concentration) and incubated in open area for 8 weeks.


The results showed that all leaf litters of those plants and their compost soils affected the fungal viability. The highest decreasing number of colony was found on onion�s leaf litters, soil containing of decomposed onion, and the mixtures of both media.

The treated B. bassiana showed significant reducing abilities of growth, conidia production and conidia germination on PDA media, except the one of control. It is suggested that the Bb-Pb2 isolate might not be effective as bioinsecticide in the soils containing either those leaf litters or composts.

reasearch team: Lisdar IS, Yusmani P, Yunimar, and Sempurna G
Key words: Beauveria bassiana, viability, leaf litters, soils


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Antibacterial Activity of Green Sirih (Piper betle L) Extract towards Food Pathogens

Green sirih (Piper betle L) extract were prepared using water, athanol and ethyl acetate extractionof the dried material. The extracts were tested for their antibacterial activities against Escherichia coli, Salmonella Typhimurium, Pseudomonas aeruginosa, Staphylococcus aureus, Bacillius cereus and Listeria monocytogenes.


At concentrations10-50% the extracts effectively inhibited the growth of all tested bacteria as shown by the clear zones which varied from 7 to 24 mm, while the minimum inhibitory concentration (MIC) varied from 0.1 to 1 %. E. coli, S. Typhimumirum and S. aureus were more resistance to the green sirih extracts than other tested bacteria.

The result showed that in general, ethanol extraction produced the best extract with strong antibacterial activities against E. coli and S. aureus. Analysis of the extract components with GC-MS revealed that sirih extract contained phenol, chavicol, eugenol, caryophylene, cylene, chalarene and others.

research team: Suliantri, B. S.L. Jenie, M.T. Suhartono, and A. Apryiantono
Key words: Green Sirih (Piper betle L), bioactive compound, antibacterial.



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Purification and Charaterization of Protease from Pathogenic Bacteria Pseudomonas aeruginosa

In the last decade, concern on protease as medical target for overcoming bacterial diseases and viral diseases has been rapidly increased because of the obvious involvement of this enzyme in the molecular of the diseases.

The purpose of the research was to purify and characterize protease from pathogenic bacteria Pseudomonas aeruginosa. The bacteria were grown in media containing triptone 1%, NaCl 1% and Yeast extract 0.5%. protease of Pseudomonas aeruginosa was purified using column chromatography with Sephadex G-100 gel.


There were three peaks of enzyme protein, which were detected on fractions 14,17 and 30. the optimum pH of the extracelluler protease from Pseudomonas aeruginosa was 8. The optimum temperature of Pseudomonas aeruginosa was 300C. Fe3+ (1dan 5 mM) was strong activator and Co 2+ was strong inhibitor.

Study on the effect of metals ion and specific inhibitors indicated that protease from Pseudomonas aeruginosa was serin metaloprotease. The apparent moleculer weights, as determined by SDS-PAGE and zymogram technique, 36 kD and 42 kD.

research team: Ace Baekhari, Maggy T. Suhartono, Nurheni Sri Palupi, and Tati Nurhayati (Unsri, IPB)
Key word : Protease, characterization, purification, pathogenic bacteria P. aeruginosa



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Recovery of Flavor Components from Blue Crab Processing Wastewater By Reverse Osmosis Technology

The waste water of blue crab pasteurization is potential to cause environmental pollution. It contained TSS 206.5 mg/L, BOD 7,092.6 mg/L and COD 51,000 mg/L. However the was the water also contains an interesting flavor compounds, which composed of 0.23% non protein nitrogen and 17 amino acids with the highest being glutamic acid.


In this research, pre-filtration steps using filter of 0.3 µ size followed by reverse osmosis has been used to reduce these pollutions load and recover the flavor compound. During pre-filtration steps, TSS was reduced to 74.8% so the turbidity increased up to 31%.

After reverse osmosis process, BOD, and COD were decreased more than 99%, and there was no amino acids detected in the permeate stream. Factors that affect performance of reverse osmosis were transmembrane pressure, temperature and pH. Higher transmembrane pressure, temperature and pH resulted in the higher permeate flux.

reasearch team: Uju, B Ibrahim, W. Trilaksani, T. Nurhayati, and B. Riyanto
Key word : blue crab, flavor, reserve osmosis


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Charateristic Changes of Shark and Stingray Surimi as Affected By Compositioning and Chill Storage of the Mince Fish

The experiment was carried out to study the effects of leaching, compositioning, and chill storage of mince fish on the characteristic changes of surimi from shark and stingray as much as 88% and 100%, respectively; with the salt soluble protein contents were 13.52% and 13.24%, repectively.


Mixture of mince shark and stingray in proportion of 25% : 75% (A1B A2) gave the highest value of gel strength being 209.29 g.cm in comparison with others composition. During chill storage , deterioration process still occurred as indicated by increasing value of acidity and content of base volatile compounds i.e. total volatile base nitrogen (TVBN) and tri-methyl amine (TMA); and also decreasing contents of urea and salt soluble protein.

Deterioration process of mince fish also affected the physical characteristic of surimi i.e decreasing values of gel strength, water holding capacity (WHC), and colour (whiteness).

reasearch team: Joko Santoso, Ade Wiguna Nur Yasin, and Santoso
Key word : chill storage, compositioning, mince-fish, shark, stingray, surimi

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The Role of Surfactant Micelles on the Partitioning of Antioxidant and the Oxidative Stability of Oil-in-Water Emulsion

Lipid oxidation system in which the fat is dispersed as emulsion droplets is still not well understood, although a large number of food exist partially or entirely in the form of emulsions.

The study was intended to examine how surfactant micelles influence the partitioning of antioxidant and hydroperoxides and how it alter the oxidative stability of oil-in-water emulsion.

To determine the ability of surfactant micelles upon the partitioning of antioxidant in oil-in-water emulsion, this type of emulsion, containing quercetin at 0, 25, 50, 75 and 100 ppm, were prepared with polyoxyethylene 100 stearyl ether (Brij 700) or polyoxyethylene sorbitan monolaurate (Tween 20) with acetate or phosphate buffer (pH 3.0 or 7.0). Structurally Birj 700 has 5 times longer polyoxyethylene groups than Tween 20.

After preparation of the emulsion, surfactant micelles (0-2%) were incorporated into the continuous phase to give a final lipid concentration of 5%. Lipid oxidation rates, as determined by the formation of lipid hydroperoxides, decreased with increasing quercetin concentrations. At pH 3, the peroxide value was higher than that at pH 7. Brij 70 decreased production of lipid hydroperoxides from palm oil-in-water-emulsions compared to the emulsions stabilized by Tween 20.

The result showed that solubilization of quercetin into the aqueous into the aqueous phase by Brij or Tween micelles did not alter the oxidative stability of palm oil-in-water emulsion, suggesting that surfactant micelle influenced the oxidation rate by mechanism other than antioxidant solubilization.

reaserch team: Posman Sibuea, Sri Raharjo, Umar Santoso, and Zuheid Noor (Unika Santo Thomas Medan and UGM)

Key word : Quercetin, surfactant micelles, and oxidative stability


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Effects of Length of Storage, Relative Humidity (RH) and Temperature On the Stability of lodized Salt

Iodine deficiency disorders (IID) is still a major public health problem in several areas of the world. Especially in developing countries. The problem of iodine decrease or loss in iodized salt and food-stuff during processing is still the a controversial issue, among public, functionary, even the scientist.

The stability of iodine is influenced by the food type, water content and cooking temperature. The objective of this research was to determine the effects of length of storage, relative humidity (RH) and temperature on the stability of iodized salt.


Analysis of iodium was performed using Ion Pair High Perfomance Liquid Chromatography (HPCL). The rate of iodine decrease was influenced by salt origin, temperature, packaging material and RH during storage.

The result of research showed that the percentage of iodate decrease in iodized salt packaged by high density polyethylene (HDPE) were 66.86% and 50.85% during storage for 14 days at temperature of 400C, RH 60% and 100%. Other result showed that the percentage of iodate decrease in iodized salt was 46.51% during storage for 28 days at temperature of 25.50C and RH 60-65%.

reasearcher: Wisnu Cahyadi (Pasundan University)
Key words : Iodine Deficiency Disorders, stability of iodized salt, ion pair-HPLC

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Purification and Charaterization of Protease from Pathogenic Bacteria Pseudomonas aeruginosa

In the last decade, concern on protease as medical target for overcoming bacterial diseases and viral diseases has been rapidly increased because of the obvious involvement of this enzyme in the molecular of the diseases.

The purpose of the research was to purify and characterize protease from pathogenic bacteria Pseudomonas aeruginosa. The bacteria were grown in media containing triptone 1%, NaCl 1% and Yeast extract 0.5%. protease of Pseudomonas aeruginosa was purified using column chromatography with Sephadex G-100 gel.


There were three peaks of enzyme protein, which were detected on fractions 14,17 and 30. the optimum pH of the extracelluler protease from Pseudomonas aeruginosa was 8. The optimum temperature of Pseudomonas aeruginosa was 300C. Fe3+ (1dan 5 mM) was strong activator and Co 2+ was strong inhibitor.

Study on the effect of metals ion and specific inhibitors indicated that protease from Pseudomonas aeruginosa was serin metaloprotease. The apparent moleculer weights, as determined by SDS-PAGE and zymogram technique, 36 kD and 42 kD.

research team: Ace Baekhari, Maggy T. Suhartono, Nurheni Sri Palupi, and Tati Nurhayati

Key word : Protease, characterization, purification, pathogenic bacteria P. aeruginosa


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Binthe biluhuta is a native food of Gorontalo, made from mixture of corn, onion, leek, basil, desiccated coconut, chili and fish.

The objective of this research was to find the best formulation for binthe biluhuta seasoning and prediction of it’s shelf life. Moisture sorption isotherm derived from the correlation of moisture content data indicated a typical sigmoidal curve implying 3 regions of water adsorption.


The water sorption region accounted for three fraction of bound water analyzed using three different mathematical models. The first water fraction ranged 0-3. 148 (%db) and the third fraction ranged 13.438-52970 (%db).

The binthe biluhuta seasoning packaged in alumina and stored at 80 and 90% RH, demonstrated the longest shelf life which were equal to 748 and 423 days, respectively.

reasearch team: Dorkas Sianipar, Sugiono, dan Rizal Syarief
Key word : Binthe biluhuta seasoning, water sorption isothermic, shelf life


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Study of Biluhuta Seasoning Formulation, Hydratation of Characteristic and Prediction of the Shelf Life Using Moisture Critical Method

Binthe biluhuta is a native food of Gorontalo, made from mixture of corn, onion, leek, basil, desiccated coconut, chili and fish.

The objective of this research was to find the best formulation for binthe biluhuta seasoning and prediction of it’s shelf life. Moisture sorption isotherm derived from the correlation of moisture content data indicated a typical sigmoidal curve implying 3 regions of water adsorption.


The water sorption region accounted for three fraction of bound water analyzed using three different mathematical models. The first water fraction ranged 0-3. 148 (%db) and the third fraction ranged 13.438-52970 (%db).

The binthe biluhuta seasoning packaged in alumina and stored at 80 and 90% RH, demonstrated the longest shelf life which were equal to 748 and 423 days, respectively.

reasearch team: Dorkas Sianipar, Sugiono, dan Rizal Syarief

Key word : Binthe biluhuta seasoning, water sorption isothermic, shelf life

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Effects of Length of Storage, Relative Humidity (RH) and Temperature On the Stability of lodized Salt

Iodine deficiency disorders (IID) is still a major public health problem in several areas of the world. Especially in developing countries. The problem of iodine decrease or loss in iodized salt and food-stuff during processing is still the a controversial issue, among public, functionary, even the scientist.

The stability of iodine is influenced by the food type, water content and cooking temperature. The objective of this research was to determine the effects of length of storage, relative humidity (RH) and temperature on the stability of iodized salt.

Analysis of iodium was performed using Ion Pair High Perfomance Liquid Chromatography (HPCL). The rate of iodine decrease was influenced by salt origin, temperature, packaging material and RH during storage.

The result of research showed that the percentage of iodate decrease in iodized salt packaged by high density polyethylene (HDPE) were 66.86% and 50.85% during storage for 14 days at temperature of 400C, RH 60% and 100%. Other result showed that the percentage of iodate decrease in iodized salt was 46.51% during storage for 28 days at temperature of 25.50C and RH 60-65%.

reasearcher: Wisnu Cahyadi (Pasundan University)
Key words : Iodine Deficiency Disorders, stability of iodized salt, ion pair-HPLC

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Purification and Charaterization of Protease from Pathogenic Bacteria Pseudomonas aeruginosa

In the last decade, concern on protease as medical target for overcoming bacterial diseases and viral diseases has been rapidly increased because of the obvious involvement of this enzyme in the molecular of the diseases.
The purpose of the research was to purify and characterize protease from pathogenic bacteria Pseudomonas aeruginosa. The bacteria were grown in media containing triptone 1%, NaCl 1% and Yeast extract 0.5%. protease of Pseudomonas aeruginosa was purified using column chromatography with Sephadex G-100 gel.

There were three peaks of enzyme protein, which were detected on fractions 14,17 and 30. the optimum pH of the extracelluler protease from Pseudomonas aeruginosa was 8. The optimum temperature of Pseudomonas aeruginosa was 300C. Fe3+ (1dan 5 mM) was strong activator and Co 2+ was strong inhibitor.

Study on the effect of metals ion and specific inhibitors indicated that protease from Pseudomonas aeruginosa was serin metaloprotease. The apparent moleculer weights, as determined by SDS-PAGE and zymogram technique, 36 kD and 42 kD.

research team: Ace Baekhari, Maggy T. Suhartono, Nurheni Sri Palupi, and Tati Nurhayati

Key word : Protease, characterization, purification, pathogenic bacteria P. aeruginosa
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Study o Safety and Shelflife of Red Chili Paste

Red chili is an important food ingredient which may not be always self, when obtained from the market. The aims of the study was to evaluate the safety and shelf life of red chili paste.

Based on survey conducted with 20 vendors in Bogor, reasearchers found red chili paste in generally composed of red chili, water, and NaCl. About 75% of the vendors claimed that their red chili paste not sold in the first market day is stored in a plastic container at room temperature and resold for the next day. They claimed that their red chili paste can be stored for 2-8 days.

The red chili paste showed moisture content of 71.6-86.8% (w/wb), pH 4.7-6.9% (w/w). About 33.3% of them positively contained excessive amount of sodium benzoate and 36% of them contained Rhodamin B which is prohibited as food coloring. From the microbiological side, the red chili paste contained 9.5 x 10 3 - 3.8 x 105cfu/g mould and yeast; 1.2 x 103 - 5.6 x 104 cfu/f spore forming bacteria; 5.2 x 102- 1.2 x 104 cfu/g S. aureus; <3 – 205 MPN/g coliform; and 6.25% samples positively contained E. coli.

This result suggested the need to improve the hygiene practices to reduce the microbial / exposure, and control of food additives use (Rhodamin B colorant and sodium benzoate). Red chili paste containing 6% NaCl can be stored for 2 days while those containing 500 and 1000 ppm sodium benzoate can be stored for 5 and 12 days. This result suggested that use of legal appropriate dose of sodium benzoate can prolog shelf life without endanger the consumer.

Researchers: Rosaria and Winiati P. Rahayu

Key words: red chili paste, sodium benzoate, Rhodamin B, microbial exposure, storage.
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